Publications

[1] Rahmatullah Roche, Bernard Moussad, Md Hossain Shuvo, Sumit Tarafder, Debswapna Bhattacharya
“EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks”, NAR, volume 52, Issue 5, Page e27, 21 March 2024. Impact Factor: 14.9 [PDF] [Source]

[2] Sumit Tarafder, Debswapna Bhattacharya
“lociPARSE: a locality-aware invariant point attention model for scoring RNA 3D structures”, bioRxiv, submitted, 2023. [PDF] [Source]

[3] Sumit Tarafder, Mazharul Islam, Swakkhar Shatabda, Atif Rahman
“Figbird: a probabilistic method for filling gaps in genome assemblies”, Bioinformatics, Volume 38, Issue 15, 1 August 2022, Pages 3717–3724. Impact Factor: 5.8 [PDF] [Source]

[4] Sumit Tarafder, Md. Toukir Ahmed, Sumaiya Iqbal, Md Tamjidul Hoque, M. Sohel Rahman
“RBSURFpred: Modeling Protein Accessible Surface Area in Real and Binary Space using Regularized and Optimized Regression”, Journal of Theoretical Biology, Volume 441, 12 Jan 2018, Pages 44 - 57. Impact Factor: 2.0 [PDF] [Source]